WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00005102 Gene Name  srd-24
Sequence Name  ? W06G6.4 Organism  Caenorhabditis elegans
Automated Description  Is affected by clk-1 based on microarray studies. Biotype  SO:0000336
Genetic Position  V :10.764 ±0.001856 Length (nt)  ? 1349
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00005102

Genomics

0 Transcripts

 

Other

0 CDSs

0 RNAi Result

92 Allele

Public Name
gk963271
WBVar02123303
WBVar02124908
gk964050
WBVar02123708
WBVar02124497
WBVar02124626
WBVar02124059
WBVar02121634
gk963302
WBVar02124267
WBVar02122684
WBVar02121793
WBVar02123140
WBVar02124428
gk963807
WBVar02122859
gk963683
gk963684
WBVar01998103
gk258522
gk541367
gk258521
gk703524
gk733234
gk676352
WBVar00594154
WBVar02107790
WBVar02107789
WBVar02107788

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00005102 16632737 16634085 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_16634086..16634249   164 V: 16634086-16634249 Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Down-regulated genes (fold change > 1.5) in two CoQ-deficient clk-1 mutant strains (e2519, qm30) compared to wild types N2. Fold-changes of intensities were calculated from the arithmetic mean of gene expression values between experimental and corresponding control group. Fold change >= 1.5 was used as cut-off. WBPaper00045774:clk-1_downregulated
  Genome-wide analysis of developmental and sex-regulated gene expression profile. self-organizing map cgc4489_group_2

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00005102 16632737 16634085 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
1349

1 Sequence Ontology Term