WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T25E12.10.1 Sequence Name  T25E12.10.1
Length (nt)  1253   Chromosome Location  V: 16733821-16735618
Chromosome . Primary Identifier  V Chromosome Location . Start  16733821
Chromosome Location . End  16735618 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T25E12.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012025 clec-38 T25E12.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T25E12.10 T25E12.10 1149   V: 16733901-16734280

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T25E12.10.1 16733821 16735618 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon212675   460   V: 16733821-16734280 Caenorhabditis elegans
Exon212676   129   V: 16734627-16734755 Caenorhabditis elegans
Exon212677   145   V: 16734799-16734943 Caenorhabditis elegans
Exon212678   197   V: 16735013-16735209 Caenorhabditis elegans
Exon212679   81   V: 16735255-16735335 Caenorhabditis elegans
Exon212680   241   V: 16735378-16735618 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T25E12.10.1 16733821 16735618 -1

1 Sequence

Length
1253

1 Sequence Ontology Term

Identifier Name Description
transcript