WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T25E12.4d.1 Sequence Name  T25E12.4d.1
Length (nt)  2547   Chromosome Location  V: 16758048-16787973
Chromosome . Primary Identifier  V Chromosome Location . Start  16758048
Chromosome Location . End  16787973 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T25E12.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012019 dkf-2 T25E12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T25E12.4d T25E12.4d 2547   V: 16758048-16758170

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T25E12.4d.1 16758048 16787973 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon212723   123   V: 16758048-16758170 Caenorhabditis elegans
Exon212725   139   V: 16759107-16759245 Caenorhabditis elegans
Exon212733   266   V: 16765195-16765460 Caenorhabditis elegans
Exon212738   126   V: 16766130-16766255 Caenorhabditis elegans
Exon212743   87   V: 16766359-16766445 Caenorhabditis elegans
Exon212748   109   V: 16766592-16766700 Caenorhabditis elegans
Exon212754   105   V: 16767766-16767870 Caenorhabditis elegans
Exon212760   92   V: 16768399-16768490 Caenorhabditis elegans
Exon212765   207   V: 16768803-16769009 Caenorhabditis elegans
Exon212770   181   V: 16769631-16769811 Caenorhabditis elegans
Exon212777   144   V: 16785385-16785528 Caenorhabditis elegans
Exon212783   750   V: 16786271-16787020 Caenorhabditis elegans
Exon212789   86   V: 16787079-16787164 Caenorhabditis elegans
Exon212794   132   V: 16787842-16787973 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T25E12.4d.1 16758048 16787973 1

1 Sequence

Length
2547

1 Sequence Ontology Term

Identifier Name Description
transcript