WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T25E12.4a.1 Sequence Name  T25E12.4a.1
Length (nt)  3681   Chromosome Location  V: 16747622-16788441
Chromosome . Primary Identifier  V Chromosome Location . Start  16747622
Chromosome Location . End  16788441 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T25E12.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012019 dkf-2 T25E12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T25E12.4a T25E12.4a 3213   V: 16747622-16747660

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T25E12.4a.1 16747622 16788441 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon212763   39   V: 16747622-16747660 Caenorhabditis elegans
Exon212765   190   V: 16747748-16747937 Caenorhabditis elegans
Exon212768   64   V: 16748495-16748558 Caenorhabditis elegans
Exon212771   308   V: 16756744-16757051 Caenorhabditis elegans
Exon212774   188   V: 16757983-16758170 Caenorhabditis elegans
Exon212778   139   V: 16759107-16759245 Caenorhabditis elegans
Exon212785   266   V: 16765195-16765460 Caenorhabditis elegans
Exon212790   126   V: 16766130-16766255 Caenorhabditis elegans
Exon212795   87   V: 16766359-16766445 Caenorhabditis elegans
Exon212800   109   V: 16766592-16766700 Caenorhabditis elegans
Exon212806   105   V: 16767766-16767870 Caenorhabditis elegans
Exon212812   92   V: 16768399-16768490 Caenorhabditis elegans
Exon212817   207   V: 16768803-16769009 Caenorhabditis elegans
Exon212822   181   V: 16769631-16769811 Caenorhabditis elegans
Exon212828   144   V: 16785385-16785528 Caenorhabditis elegans
Exon212834   750   V: 16786271-16787020 Caenorhabditis elegans
Exon212840   86   V: 16787079-16787164 Caenorhabditis elegans
Exon212851   600   V: 16787842-16788441 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T25E12.4a.1 16747622 16788441 1

1 Sequence

Length
3681

1 Sequence Ontology Term

Identifier Name Description
transcript