WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T25E12.4f.1 Sequence Name  T25E12.4f.1
Length (nt)  3288   Chromosome Location  V: 16747622-16787973
Chromosome . Primary Identifier  V Chromosome Location . Start  16747622
Chromosome Location . End  16787973 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T25E12.4f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012019 dkf-2 T25E12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T25E12.4f T25E12.4f 3288   V: 16747622-16747660

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T25E12.4f.1 16747622 16787973 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon212764   39   V: 16747622-16747660 Caenorhabditis elegans
Exon212767   190   V: 16747748-16747937 Caenorhabditis elegans
Exon212770   64   V: 16748495-16748558 Caenorhabditis elegans
Exon212773   308   V: 16756744-16757051 Caenorhabditis elegans
Exon212776   188   V: 16757983-16758170 Caenorhabditis elegans
Exon212781   139   V: 16759107-16759245 Caenorhabditis elegans
Exon212789   266   V: 16765195-16765460 Caenorhabditis elegans
Exon212794   126   V: 16766130-16766255 Caenorhabditis elegans
Exon212799   87   V: 16766359-16766445 Caenorhabditis elegans
Exon212803   109   V: 16766592-16766700 Caenorhabditis elegans
Exon212810   105   V: 16767766-16767870 Caenorhabditis elegans
Exon212811   75   V: 16768006-16768080 Caenorhabditis elegans
Exon212816   92   V: 16768399-16768490 Caenorhabditis elegans
Exon212821   207   V: 16768803-16769009 Caenorhabditis elegans
Exon212826   181   V: 16769631-16769811 Caenorhabditis elegans
Exon212833   144   V: 16785385-16785528 Caenorhabditis elegans
Exon212839   750   V: 16786271-16787020 Caenorhabditis elegans
Exon212845   86   V: 16787079-16787164 Caenorhabditis elegans
Exon212850   132   V: 16787842-16787973 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T25E12.4f.1 16747622 16787973 1

1 Sequence

Length
3288

1 Sequence Ontology Term

Identifier Name Description
transcript