WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T25E12.4c.1 Sequence Name  T25E12.4c.1
Length (nt)  2672   Chromosome Location  V: 16764205-16787973
Chromosome . Primary Identifier  V Chromosome Location . Start  16764205
Chromosome Location . End  16787973 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T25E12.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012019 dkf-2 T25E12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T25E12.4c T25E12.4c 2619   V: 16764258-16764591

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T25E12.4c.1 16764205 16787973 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon212728   387   V: 16764205-16764591 Caenorhabditis elegans
Exon212732   266   V: 16765195-16765460 Caenorhabditis elegans
Exon212737   126   V: 16766130-16766255 Caenorhabditis elegans
Exon212742   87   V: 16766359-16766445 Caenorhabditis elegans
Exon212747   109   V: 16766592-16766700 Caenorhabditis elegans
Exon212753   105   V: 16767766-16767870 Caenorhabditis elegans
Exon212759   92   V: 16768399-16768490 Caenorhabditis elegans
Exon212764   207   V: 16768803-16769009 Caenorhabditis elegans
Exon212769   181   V: 16769631-16769811 Caenorhabditis elegans
Exon212776   144   V: 16785385-16785528 Caenorhabditis elegans
Exon212782   750   V: 16786271-16787020 Caenorhabditis elegans
Exon212788   86   V: 16787079-16787164 Caenorhabditis elegans
Exon212793   132   V: 16787842-16787973 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T25E12.4c.1 16764205 16787973 1

1 Sequence

Length
2672

1 Sequence Ontology Term

Identifier Name Description
transcript