WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T20B3.1b.1 Sequence Name  T20B3.1b.1
Length (nt)  1993   Chromosome Location  V: 16815561-16820716
Chromosome . Primary Identifier  V Chromosome Location . Start  16815561
Chromosome Location . End  16820716 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20B3.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011850 T20B3.1 T20B3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20B3.1b T20B3.1b 1833   V: 16815577-16815661

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T20B3.1b.1 16815561 16820716 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon212836   101   V: 16815561-16815661 Caenorhabditis elegans
Exon212839   128   V: 16815710-16815837 Caenorhabditis elegans
Exon212841   167   V: 16816284-16816450 Caenorhabditis elegans
Exon212843   125   V: 16816507-16816631 Caenorhabditis elegans
Exon212845   116   V: 16817179-16817294 Caenorhabditis elegans
Exon212847   90   V: 16817342-16817431 Caenorhabditis elegans
Exon212849   117   V: 16817479-16817595 Caenorhabditis elegans
Exon212851   102   V: 16817646-16817747 Caenorhabditis elegans
Exon212853   192   V: 16817867-16818058 Caenorhabditis elegans
Exon212855   258   V: 16818110-16818367 Caenorhabditis elegans
Exon212857   85   V: 16818414-16818498 Caenorhabditis elegans
Exon212859   145   V: 16818542-16818686 Caenorhabditis elegans
Exon212861   102   V: 16820302-16820403 Caenorhabditis elegans
Exon212863   265   V: 16820452-16820716 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T20B3.1b.1 16815561 16820716 1

1 Sequence

Length
1993

1 Sequence Ontology Term

Identifier Name Description
transcript