WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T20B3.1a.1 Sequence Name  T20B3.1a.1
Length (nt)  1977   Chromosome Location  V: 16815567-16820712
Chromosome . Primary Identifier  V Chromosome Location . Start  16815567
Chromosome Location . End  16820712 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20B3.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011850 T20B3.1 T20B3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20B3.1a T20B3.1a 1827   V: 16815577-16815661

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T20B3.1a.1 16815567 16820712 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon212891   95   V: 16815567-16815661 Caenorhabditis elegans
Exon212892   128   V: 16815710-16815837 Caenorhabditis elegans
Exon212894   167   V: 16816284-16816450 Caenorhabditis elegans
Exon212896   125   V: 16816507-16816631 Caenorhabditis elegans
Exon212898   116   V: 16817179-16817294 Caenorhabditis elegans
Exon212900   90   V: 16817342-16817431 Caenorhabditis elegans
Exon212902   117   V: 16817479-16817595 Caenorhabditis elegans
Exon212904   102   V: 16817646-16817747 Caenorhabditis elegans
Exon212906   192   V: 16817867-16818058 Caenorhabditis elegans
Exon212908   252   V: 16818110-16818361 Caenorhabditis elegans
Exon212910   85   V: 16818414-16818498 Caenorhabditis elegans
Exon212912   145   V: 16818542-16818686 Caenorhabditis elegans
Exon212914   102   V: 16820302-16820403 Caenorhabditis elegans
Exon212916   261   V: 16820452-16820712 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T20B3.1a.1 16815567 16820712 1

1 Sequence

Length
1977

1 Sequence Ontology Term

Identifier Name Description
transcript