WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T20B3.7.2 Sequence Name  T20B3.7.2
Length (nt)  1039   Chromosome Location  V: 16833305-16839142
Chromosome . Primary Identifier  V Chromosome Location . Start  16833305
Chromosome Location . End  16839142 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20B3.7.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004026 phy-3 T20B3.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20B3.7 T20B3.7 957   V: 16833316-16833523

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T20B3.7.2 16833305 16839142 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon212876   219   V: 16833305-16833523 Caenorhabditis elegans
Exon212883   311   V: 16837674-16837984 Caenorhabditis elegans
Exon212885   151   V: 16838236-16838386 Caenorhabditis elegans
Exon212887   89   V: 16838433-16838521 Caenorhabditis elegans
Exon212889   269   V: 16838874-16839142 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T20B3.7.2 16833305 16839142 1

1 Sequence

Length
1039

1 Sequence Ontology Term

Identifier Name Description
transcript