WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y102A5B.3.1 Sequence Name  Y102A5B.3.1
Length (nt)  1126   Chromosome Location  V: 16850394-16852102
Chromosome . Primary Identifier  V Chromosome Location . Start  16850394
Chromosome Location . End  16852102 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y102A5B.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013609 clec-37 Y102A5B.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y102A5B.3 Y102A5B.3 1068   V: 16850429-16850802

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y102A5B.3.1 16850394 16852102 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon212923   409   V: 16850394-16850802 Caenorhabditis elegans
Exon212924   129   V: 16850929-16851057 Caenorhabditis elegans
Exon212925   145   V: 16851127-16851271 Caenorhabditis elegans
Exon212926   152   V: 16851312-16851463 Caenorhabditis elegans
Exon212927   45   V: 16851624-16851668 Caenorhabditis elegans
Exon212928   69   V: 16851792-16851860 Caenorhabditis elegans
Exon212929   177   V: 16851926-16852102 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y102A5B.3.1 16850394 16852102 -1

1 Sequence

Length
1126

1 Sequence Ontology Term

Identifier Name Description
transcript