WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y102A5B.2b.1 Sequence Name  Y102A5B.2b.1
Length (nt)  1083   Chromosome Location  V: 16852291-16854053
Chromosome . Primary Identifier  V Chromosome Location . Start  16852291
Chromosome Location . End  16854053 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y102A5B.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013608 clec-35 Y102A5B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y102A5B.2b Y102A5B.2b 1083   V: 16852291-16852673

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y102A5B.2b.1 16852291 16854053 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon212931   383   V: 16852291-16852673 Caenorhabditis elegans
Exon212933   129   V: 16852800-16852928 Caenorhabditis elegans
Exon212934   160   V: 16852983-16853142 Caenorhabditis elegans
Exon212937   152   V: 16853183-16853334 Caenorhabditis elegans
Exon212939   54   V: 16853625-16853678 Caenorhabditis elegans
Exon212941   69   V: 16853775-16853843 Caenorhabditis elegans
Exon212942   136   V: 16853918-16854053 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y102A5B.2b.1 16852291 16854053 -1

1 Sequence

Length
1083

1 Sequence Ontology Term

Identifier Name Description
transcript