WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y102A5B.1 Sequence Name  Y102A5B.1
Length (nt)  1092   Chromosome Location  V: 16854646-16854838
Chromosome . Primary Identifier  V Chromosome Location . Start  16854646
Chromosome Location . End  16854838
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y102A5B.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE35640 CLEC-27 40.4 363 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00055125
WBRNAi00015276
WBRNAi00019790
WBRNAi00036445

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y102A5B.1 16854646 16854838 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013607 clec-27 Y102A5B.1 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y102A5B.1 16854646 16854838 1
CDS:Y102A5B.1 16854897 16854956 1
CDS:Y102A5B.1 16855002 16855055 1
CDS:Y102A5B.1 16855101 16855249 1
CDS:Y102A5B.1 16855296 16855440 1
CDS:Y102A5B.1 16855487 16855615 1
CDS:Y102A5B.1 16855791 16856152 1

1 Sequence

Length
1092

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y102A5B.1.1 Y102A5B.1.1 1276   V: 16854633-16856323