WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F49A5.3 Sequence Name  F49A5.3
Length (nt)  1044   Chromosome Location  V: 16858429-16858624
Chromosome . Primary Identifier  V Chromosome Location . Start  16858429
Chromosome Location . End  16858624
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49A5.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52396 CLEC-22 39.4 347 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00047782
WBRNAi00015278
WBRNAi00032505

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F49A5.3 16858429 16858624 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009855 clec-22 F49A5.3 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F49A5.3 16858429 16858624 1
CDS:F49A5.3 16858672 16858728 1
CDS:F49A5.3 16859043 16859191 1
CDS:F49A5.3 16859237 16859381 1
CDS:F49A5.3 16859424 16859552 1
CDS:F49A5.3 16859673 16860040 1

1 Sequence

Length
1044

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F49A5.3.1 F49A5.3.1 1044   V: 16858429-16860040