WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49A5.8.1 Sequence Name  F49A5.8.1
Length (nt)  1302   Chromosome Location  V: 16873942-16875455
Chromosome . Primary Identifier  V Chromosome Location . Start  16873942
Chromosome Location . End  16875455 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49A5.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005770 srw-23 F49A5.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49A5.8 F49A5.8 1302   V: 16873942-16874666

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49A5.8.1 16873942 16875455 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon213014   725   V: 16873942-16874666 Caenorhabditis elegans
Exon213015   354   V: 16874789-16875142 Caenorhabditis elegans
Exon213016   223   V: 16875233-16875455 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49A5.8.1 16873942 16875455 1

1 Sequence

Length
1302

1 Sequence Ontology Term

Identifier Name Description
transcript