WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y102A5C.4.1 Sequence Name  Y102A5C.4.1
Length (nt)  1729   Chromosome Location  V: 16922252-16924394
Chromosome . Primary Identifier  V Chromosome Location . Start  16922252
Chromosome Location . End  16924394 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y102A5C.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013613 Y102A5C.4 Y102A5C.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y102A5C.4 Y102A5C.4 1593   V: 16922252-16922518

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y102A5C.4.1 16922252 16924394 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon213099   267   V: 16922252-16922518 Caenorhabditis elegans
Exon213100   351   V: 16922615-16922965 Caenorhabditis elegans
Exon213101   123   V: 16923070-16923192 Caenorhabditis elegans
Exon213102   129   V: 16923240-16923368 Caenorhabditis elegans
Exon213103   245   V: 16923420-16923664 Caenorhabditis elegans
Exon213104   614   V: 16923781-16924394 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y102A5C.4.1 16922252 16924394 1

1 Sequence

Length
1729

1 Sequence Ontology Term

Identifier Name Description
transcript