WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y102A5C.14.1 Sequence Name  Y102A5C.14.1
Length (nt)  2419   Chromosome Location  V: 16947142-16949709
Chromosome . Primary Identifier  V Chromosome Location . Start  16947142
Chromosome Location . End  16949709 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y102A5C.14.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013620 fbxa-111 Y102A5C.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y102A5C.14 Y102A5C.14 867   V: 16948659-16948826

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y102A5C.14.1 16947142 16949709 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon213141   1685   V: 16947142-16948826 Caenorhabditis elegans
Exon213145   580   V: 16948875-16949454 Caenorhabditis elegans
Exon213146   78   V: 16949504-16949581 Caenorhabditis elegans
Exon213147   76   V: 16949634-16949709 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y102A5C.14.1 16947142 16949709 -1

1 Sequence

Length
2419

1 Sequence Ontology Term

Identifier Name Description
transcript