WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y102A5C.13.1 Sequence Name  Y102A5C.13.1
Length (nt)  717   Chromosome Location  V: 16947158-16948111
Chromosome . Primary Identifier  V Chromosome Location . Start  16947158
Chromosome Location . End  16948111 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y102A5C.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013619 fbxa-112 Y102A5C.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y102A5C.13 Y102A5C.13 717   V: 16947158-16947352

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y102A5C.13.1 16947158 16948111 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon213142   195   V: 16947158-16947352 Caenorhabditis elegans
Exon213143   481   V: 16947403-16947883 Caenorhabditis elegans
Exon213144   41   V: 16948071-16948111 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y102A5C.13.1 16947158 16948111 -1

1 Sequence

Length
717

1 Sequence Ontology Term

Identifier Name Description
transcript