WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y102A5C.18 Sequence Name  Y102A5C.18
Length (nt)  1029   Chromosome Location  V: 16958952-16959061
Chromosome . Primary Identifier  V Chromosome Location . Start  16958952
Chromosome Location . End  16959061
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y102A5C.18

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE20390 EFL-1 39.5 342 Caenorhabditis elegans
 

Other

52 RNAi

WormBase ID
WBRNAi00055136
WBRNAi00076036
WBRNAi00062687
WBRNAi00077801
WBRNAi00077800
WBRNAi00019801
WBRNAi00063033
WBRNAi00069939
WBRNAi00101862
WBRNAi00086412
WBRNAi00086413
WBRNAi00086545
WBRNAi00086552
WBRNAi00086553
WBRNAi00077802
WBRNAi00081704
WBRNAi00084458
WBRNAi00084462
WBRNAi00086814
WBRNAi00081707
WBRNAi00086706
WBRNAi00086711
WBRNAi00063031
WBRNAi00063056
WBRNAi00115669
WBRNAi00104820
WBRNAi00104810
WBRNAi00104809
WBRNAi00104812
WBRNAi00104811

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y102A5C.18 16958952 16959061 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001161 efl-1 Y102A5C.18 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y102A5C.18 16958952 16959061 -1
CDS:Y102A5C.18 16960163 16960397 -1
CDS:Y102A5C.18 16963451 16963594 -1
CDS:Y102A5C.18 16964383 16964533 -1
CDS:Y102A5C.18 16965192 16965301 -1
CDS:Y102A5C.18 16965349 16965479 -1
CDS:Y102A5C.18 16965526 16965673 -1

1 Sequence

Length
1029

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y102A5C.18.1 Y102A5C.18.1 1393   V: 16958590-16965675