WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y102A5C.19.1 Sequence Name  Y102A5C.19.1
Length (nt)  1045   Chromosome Location  V: 16966814-16968586
Chromosome . Primary Identifier  V Chromosome Location . Start  16966814
Chromosome Location . End  16968586 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y102A5C.19.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013623 fbxa-90 Y102A5C.19 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y102A5C.19 Y102A5C.19 906   V: 16966914-16966984

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y102A5C.19.1 16966814 16968586 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon213234   171   V: 16966814-16966984 Caenorhabditis elegans
Exon213235   640   V: 16967032-16967671 Caenorhabditis elegans
Exon213236   234   V: 16968353-16968586 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y102A5C.19.1 16966814 16968586 1

1 Sequence

Length
1045

1 Sequence Ontology Term

Identifier Name Description
transcript