WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y102A5C.40.1 Sequence Name  Y102A5C.40.1
Length (nt)  501   Chromosome Location  V: 16986460-16987135
Chromosome . Primary Identifier  V Chromosome Location . Start  16986460
Chromosome Location . End  16987135 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y102A5C.40.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00077624 Y102A5C.40 Y102A5C.40 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y102A5C.40 Y102A5C.40 501   V: 16986460-16986582

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y102A5C.40.1 16986460 16987135 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon213214   123   V: 16986460-16986582 Caenorhabditis elegans
Exon213215   176   V: 16986631-16986806 Caenorhabditis elegans
Exon213216   202   V: 16986934-16987135 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y102A5C.40.1 16986460 16987135 -1

1 Sequence

Length
501

1 Sequence Ontology Term

Identifier Name Description
transcript