WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y102A5C.25.1 Sequence Name  Y102A5C.25.1
Length (nt)  957   Chromosome Location  V: 16980668-16981880
Chromosome . Primary Identifier  V Chromosome Location . Start  16980668
Chromosome Location . End  16981880 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y102A5C.25.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013626 srz-54 Y102A5C.25 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y102A5C.25 Y102A5C.25 957   V: 16980668-16980838

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y102A5C.25.1 16980668 16981880 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon213258   171   V: 16980668-16980838 Caenorhabditis elegans
Exon213259   104   V: 16980932-16981035 Caenorhabditis elegans
Exon213260   274   V: 16981086-16981359 Caenorhabditis elegans
Exon213261   162   V: 16981409-16981570 Caenorhabditis elegans
Exon213262   246   V: 16981635-16981880 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y102A5C.25.1 16980668 16981880 1

1 Sequence

Length
957

1 Sequence Ontology Term

Identifier Name Description
transcript