WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49H6.1.1 Sequence Name  F49H6.1.1
Length (nt)  738   Chromosome Location  V: 17010014-17011849
Chromosome . Primary Identifier  V Chromosome Location . Start  17010014
Chromosome Location . End  17011849 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49H6.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009905 clec-240 F49H6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49H6.1 F49H6.1 738   V: 17010014-17010146

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49H6.1.1 17010014 17011849 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon213259   133   V: 17010014-17010146 Caenorhabditis elegans
Exon213260   63   V: 17010198-17010260 Caenorhabditis elegans
Exon213261   81   V: 17010740-17010820 Caenorhabditis elegans
Exon213262   59   V: 17010871-17010929 Caenorhabditis elegans
Exon213263   106   V: 17010974-17011079 Caenorhabditis elegans
Exon213264   196   V: 17011134-17011329 Caenorhabditis elegans
Exon213265   48   V: 17011704-17011751 Caenorhabditis elegans
Exon213266   52   V: 17011798-17011849 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49H6.1.1 17010014 17011849 1

1 Sequence

Length
738

1 Sequence Ontology Term

Identifier Name Description
transcript