WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49H6.2.1 Sequence Name  F49H6.2.1
Length (nt)  717   Chromosome Location  V: 17012049-17013332
Chromosome . Primary Identifier  V Chromosome Location . Start  17012049
Chromosome Location . End  17013332 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49H6.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009906 clec-241 F49H6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49H6.2 F49H6.2 639   V: 17012127-17012172

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49H6.2.1 17012049 17013332 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon213267   124   V: 17012049-17012172 Caenorhabditis elegans
Exon213268   48   V: 17012222-17012269 Caenorhabditis elegans
Exon213269   193   V: 17012316-17012508 Caenorhabditis elegans
Exon213270   106   V: 17012652-17012757 Caenorhabditis elegans
Exon213271   59   V: 17012932-17012990 Caenorhabditis elegans
Exon213272   48   V: 17013039-17013086 Caenorhabditis elegans
Exon213273   54   V: 17013146-17013199 Caenorhabditis elegans
Exon213274   85   V: 17013248-17013332 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49H6.2.1 17012049 17013332 -1

1 Sequence

Length
717

1 Sequence Ontology Term

Identifier Name Description
transcript