WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49H6.5b.1 Sequence Name  F49H6.5b.1
Length (nt)  969   Chromosome Location  V: 17023769-17025347
Chromosome . Primary Identifier  V Chromosome Location . Start  17023769
Chromosome Location . End  17025347 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49H6.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009908 F49H6.5 F49H6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49H6.5b F49H6.5b 969   V: 17023769-17023997

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49H6.5b.1 17023769 17025347 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon213346   229   V: 17023769-17023997 Caenorhabditis elegans
Exon213349   104   V: 17024056-17024159 Caenorhabditis elegans
Exon213352   120   V: 17024395-17024514 Caenorhabditis elegans
Exon213355   339   V: 17024569-17024907 Caenorhabditis elegans
Exon213358   121   V: 17025123-17025243 Caenorhabditis elegans
Exon213359   56   V: 17025292-17025347 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49H6.5b.1 17023769 17025347 1

1 Sequence

Length
969

1 Sequence Ontology Term

Identifier Name Description
transcript