WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05E12.7a.1 Sequence Name  T05E12.7a.1
Length (nt)  1029   Chromosome Location  V: 17090379-17091714
Chromosome . Primary Identifier  V Chromosome Location . Start  17090379
Chromosome Location . End  17091714 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05E12.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005444 srh-237 T05E12.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05E12.7a T05E12.7a 918   V: 17090390-17090699

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05E12.7a.1 17090379 17091714 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon213438   321   V: 17090379-17090699 Caenorhabditis elegans
Exon213440   185   V: 17090887-17091071 Caenorhabditis elegans
Exon213442   231   V: 17091118-17091348 Caenorhabditis elegans
Exon213448   292   V: 17091423-17091714 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05E12.7a.1 17090379 17091714 1

1 Sequence

Length
1029

1 Sequence Ontology Term

Identifier Name Description
transcript