WormMine: Gene WBGene00014753

• WormBase Gene ID: WBGene00014753
• Gene Name: F40D4.14
• Sequence Name: F40D4.14
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by several genes including pptr-1; glh-4; and glh-1 based on RNA-seq studies. Is affected by rifampin; Psoralens; and Sirolimus based on RNA-seq studies.
• Biotype: SO:0000336
• Genetic Position: :±
• Length (nt): 6442

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00014753

Genomics

0 Transcripts

Other

0 CDSs

0 RNAi Result

124 Allele

• gk963271
• gk963489
• gk963304
• gk963637
• WBVar02123303
• gk964050
• gk963587
• gk963588
• WBVar02124497
• WBVar02124059
• WBVar02124270
• WBVar02122864
• gk964305
• WBVar02121796
• WBVar02123142
• WBVar02124430
• WBVar02122255
• gk964287
• gk962704
• gk962630
• gk963919
• WBVar00244673
• WBVar00244672
• WBVar01652998
• WBVar01652997
• h15503
• ttTi6597
• ttTi6609
• WBVar01276162
• WBVar01276160

1 Chromosome

• WormBase ID: V
• Organism: Caenorhabditis elegans
• Length (nt): 20924180

1 Chromosome Location

• Feature . Primary Identifier: WBGene00014753
• Start: 17146825
• End: 17153266
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrV_17143886..17146824
• Length (nt): 2939
• Chromosome Location: V: 17143886-17146824
• Organism: Caenorhabditis elegans

7 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly decreased expression in eat-2(ad1116) comparing to in N2 at 3-days post L4 adult hermaphrodite animals.	DESeq2(v1.14.1), fold change > 2, p-value < 0.05	WBPaper00055354:eat-2(ad1116)_downregulated
	Transcripts that showed significantly increased expression in animals lacking P granules by RNAi experiments targeting pgl-1, pgl-3, glh-1 and glh-4, and unc-119-GFP(+), comparing to in control animals, at 2-day post L4 adult hermaphrodite stage.	DESeq2, Benjamini-Hochberg multiple hypothesis corrected p-value < 0.05 and fold change > 2.	WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
	Transcripts that showed significantly increased expression in animals lacking P granules by RNAi experiments targeting pgl-1, pgl-3, glh-1 and glh-4, and unc-119-GFP(-), comparing to in control animals, at 2-day post L4 adult hermaphrodite stage.	DESeq2, Benjamini-Hochberg multiple hypothesis corrected p-value < 0.05 and fold change > 2.	WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
	Transcripts that showed significantly decreased expression in whole animal day 1 N2 adults comparing to in whole animal day 8 N2 adults.	DESeq2, FDR < 0.05, fold change > 2.	WBPaper00066978:Day1Adult_vs_Day8Adult_downregulated_neuron
	Transcripts that showed significantly decreased expression after animals were treated with 100uM Rapamycin, 50uM Rifampicin and 100uM Psora from day 1 to day 3 adult hermaphradite.	DESeq2(v1.14.1), fold change > 2, p-value < 0.05	WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
	Targets of endo-siRNA that showed significantly increased expression in BFF39[pptr-1(tm3103);Pmex-5::gfp::h2b::tbb-2 (mjIs134 II)] comparing to in SX1263[Pmex-5::gfp::h2b::tbb-2 (mjIs134 II)] dissected gonad isolated from 1-day old adult hermaphrodites.	DESeq2, fold change > 2, FDR < 0.01	WBPaper00057140:pptr-1(tm3103)_upregulated
	Transcripts that showed significantly decreased expression in tdc-1(n3419);odIs77 comparing to in odIs77 control animals.	EdgeR, FDR<0.01	WBPaper00060921:tdc-1(n3419)_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00014753
• Start: 17146825
• End: 17153266
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 6442

1 Sequence Ontology Term