WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F40D4.17.1 Sequence Name  F40D4.17.1
Length (nt)  518   Chromosome Location  V: 17154574-17155434
Chromosome . Primary Identifier  V Chromosome Location . Start  17154574
Chromosome Location . End  17155434 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40D4.17.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00194682 F40D4.17 F40D4.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F40D4.17 F40D4.17 180   V: 17154753-17154761

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F40D4.17.1 17154574 17155434 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon213516   188   V: 17154574-17154761 Caenorhabditis elegans
Exon213517   244   V: 17154960-17155203 Caenorhabditis elegans
Exon213518   86   V: 17155349-17155434 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F40D4.17.1 17154574 17155434 -1

1 Sequence

Length
518

1 Sequence Ontology Term

Identifier Name Description
transcript