WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F40D4.13.1 Sequence Name  F40D4.13.1
Length (nt)  1182   Chromosome Location  V: 17155874-17157254
Chromosome . Primary Identifier  V Chromosome Location . Start  17155874
Chromosome Location . End  17157254 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40D4.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009572 F40D4.13 F40D4.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F40D4.13 F40D4.13 1023   V: 17156033-17156266

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F40D4.13.1 17155874 17157254 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon213519   393   V: 17155874-17156266 Caenorhabditis elegans
Exon213521   512   V: 17156320-17156831 Caenorhabditis elegans
Exon213522   277   V: 17156978-17157254 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F40D4.13.1 17155874 17157254 -1

1 Sequence

Length
1182

1 Sequence Ontology Term

Identifier Name Description
transcript