WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F40D4.5 Sequence Name  F40D4.5
Length (nt)  933   Chromosome Location  V: 17176716-17177068
Chromosome . Primary Identifier  V Chromosome Location . Start  17176716
Chromosome Location . End  17177068
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40D4.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19839 SRSX-1 35.5 310 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00046832

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F40D4.5 17176716 17177068 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009566 srsx-1 F40D4.5 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F40D4.5 17176716 17177068 -1
CDS:F40D4.5 17177113 17177351 -1
CDS:F40D4.5 17177402 17177609 -1
CDS:F40D4.5 17177935 17178067 -1

1 Sequence

Length
933

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F40D4.5.1 F40D4.5.1 933   V: 17176716-17178067