WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F40D4.3.1 Sequence Name  F40D4.3.1
Length (nt)  1248   Chromosome Location  V: 17182345-17183870
Chromosome . Primary Identifier  V Chromosome Location . Start  17182345
Chromosome Location . End  17183870 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40D4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005375 srh-159 F40D4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F40D4.3 F40D4.3 1002   V: 17182345-17182663

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F40D4.3.1 17182345 17183870 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon213578   319   V: 17182345-17182663 Caenorhabditis elegans
Exon213579   194   V: 17182780-17182973 Caenorhabditis elegans
Exon213580   304   V: 17183089-17183392 Caenorhabditis elegans
Exon213581   431   V: 17183440-17183870 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F40D4.3.1 17182345 17183870 1

1 Sequence

Length
1248

1 Sequence Ontology Term

Identifier Name Description
transcript