WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y68A4A.3.1 Sequence Name  Y68A4A.3.1
Length (nt)  972   Chromosome Location  V: 17189186-17190499
Chromosome . Primary Identifier  V Chromosome Location . Start  17189186
Chromosome Location . End  17190499 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y68A4A.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006235 str-199 Y68A4A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y68A4A.3 Y68A4A.3 972   V: 17189186-17189548

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y68A4A.3.1 17189186 17190499 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon213589   363   V: 17189186-17189548 Caenorhabditis elegans
Exon213590   142   V: 17189602-17189743 Caenorhabditis elegans
Exon213591   135   V: 17189795-17189929 Caenorhabditis elegans
Exon213592   79   V: 17189979-17190057 Caenorhabditis elegans
Exon213593   88   V: 17190108-17190195 Caenorhabditis elegans
Exon213594   165   V: 17190335-17190499 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y68A4A.3.1 17189186 17190499 -1

1 Sequence

Length
972

1 Sequence Ontology Term

Identifier Name Description
transcript