WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y61B8A.1.1 Sequence Name  Y61B8A.1.1
Length (nt)  1059   Chromosome Location  V: 17252931-17255128
Chromosome . Primary Identifier  V Chromosome Location . Start  17252931
Chromosome Location . End  17255128 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y61B8A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005335 srh-116 Y61B8A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y61B8A.1 Y61B8A.1 1059   V: 17252931-17253004

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y61B8A.1.1 17252931 17255128 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon213732   74   V: 17252931-17253004 Caenorhabditis elegans
Exon213733   624   V: 17253067-17253690 Caenorhabditis elegans
Exon213734   361   V: 17254768-17255128 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y61B8A.1.1 17252931 17255128 -1

1 Sequence

Length
1059

1 Sequence Ontology Term

Identifier Name Description
transcript