WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y61B8A.2.1 Sequence Name  Y61B8A.2.1
Length (nt)  1130   Chromosome Location  V: 17255754-17257194
Chromosome . Primary Identifier  V Chromosome Location . Start  17255754
Chromosome Location . End  17257194 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y61B8A.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005334 srh-115 Y61B8A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y61B8A.2 Y61B8A.2 1071   V: 17255754-17256114

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y61B8A.2.1 17255754 17257194 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon213769   361   V: 17255754-17256114 Caenorhabditis elegans
Exon213770   630   V: 17256359-17256988 Caenorhabditis elegans
Exon213772   139   V: 17257056-17257194 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y61B8A.2.1 17255754 17257194 1

1 Sequence

Length
1130

1 Sequence Ontology Term

Identifier Name Description
transcript