WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47H4.9.1 Sequence Name  F47H4.9.1
Length (nt)  1796   Chromosome Location  V: 17345214-17347781
Chromosome . Primary Identifier  V Chromosome Location . Start  17345214
Chromosome Location . End  17347781 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47H4.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009840 fbxa-189 F47H4.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47H4.9 F47H4.9 1710   V: 17345228-17345295

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F47H4.9.1 17345214 17347781 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon213904   82   V: 17345214-17345295 Caenorhabditis elegans
Exon213905   73   V: 17345345-17345417 Caenorhabditis elegans
Exon213906   50   V: 17345465-17345514 Caenorhabditis elegans
Exon213907   210   V: 17345652-17345861 Caenorhabditis elegans
Exon213908   84   V: 17346131-17346214 Caenorhabditis elegans
Exon213909   108   V: 17346260-17346367 Caenorhabditis elegans
Exon213910   207   V: 17346415-17346621 Caenorhabditis elegans
Exon213911   84   V: 17346707-17346790 Caenorhabditis elegans
Exon213912   634   V: 17346837-17347470 Caenorhabditis elegans
Exon213913   264   V: 17347518-17347781 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F47H4.9.1 17345214 17347781 1

1 Sequence

Length
1796

1 Sequence Ontology Term

Identifier Name Description
transcript