WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47H4.2b.1 Sequence Name  F47H4.2b.1
Length (nt)  3233   Chromosome Location  V: 17353323-17360204
Chromosome . Primary Identifier  V Chromosome Location . Start  17353323
Chromosome Location . End  17360204 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47H4.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009835 F47H4.2 F47H4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47H4.2b F47H4.2b 3099   V: 17353373-17353386

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F47H4.2b.1 17353323 17360204 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon213905   64   V: 17353323-17353386 Caenorhabditis elegans
Exon213908   718   V: 17353439-17354156 Caenorhabditis elegans
Exon213910   264   V: 17354206-17354469 Caenorhabditis elegans
Exon213911   41   V: 17354672-17354712 Caenorhabditis elegans
Exon213912   730   V: 17356228-17356957 Caenorhabditis elegans
Exon213913   264   V: 17357006-17357269 Caenorhabditis elegans
Exon213915   104   V: 17358962-17359065 Caenorhabditis elegans
Exon213917   694   V: 17359111-17359804 Caenorhabditis elegans
Exon213919   354   V: 17359851-17360204 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F47H4.2b.1 17353323 17360204 1

1 Sequence

Length
3233

1 Sequence Ontology Term

Identifier Name Description
transcript