WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y20C6A.1a Sequence Name  Y20C6A.1a
Length (nt)  2955   Chromosome Location  V: 17371605-17371880
Chromosome . Primary Identifier  V Chromosome Location . Start  17371605
Chromosome Location . End  17371880
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y20C6A.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37058 Y20C6A.1, isoform a 114.1 984 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00055650
WBRNAi00020117
WBRNAi00036709

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y20C6A.1a 17371605 17371880 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012491 Y20C6A.1 Y20C6A.1 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y20C6A.1a 17371605 17371880 -1
CDS:Y20C6A.1a 17371929 17372616 -1
CDS:Y20C6A.1a 17372662 17372765 -1
CDS:Y20C6A.1a 17373527 17373790 -1
CDS:Y20C6A.1a 17373841 17374451 -1
CDS:Y20C6A.1a 17375146 17375189 -1
CDS:Y20C6A.1a 17375310 17375545 -1
CDS:Y20C6A.1a 17375771 17376488 -1
CDS:Y20C6A.1a 17376690 17376703 -1

1 Sequence

Length
2955

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y20C6A.1a.1 Y20C6A.1a.1 3088   V: 17371514-17376745