WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F20E11.1.1 Sequence Name  F20E11.1.1
Length (nt)  996   Chromosome Location  V: 17458533-17460161
Chromosome . Primary Identifier  V Chromosome Location . Start  17458533
Chromosome Location . End  17460161 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F20E11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008981 srz-48 F20E11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F20E11.1 F20E11.1 996   V: 17458533-17458793

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F20E11.1.1 17458533 17460161 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon214066   261   V: 17458533-17458793 Caenorhabditis elegans
Exon214067   162   V: 17458847-17459008 Caenorhabditis elegans
Exon214068   292   V: 17459051-17459342 Caenorhabditis elegans
Exon214069   107   V: 17459769-17459875 Caenorhabditis elegans
Exon214070   174   V: 17459988-17460161 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F20E11.1.1 17458533 17460161 -1

1 Sequence

Length
996

1 Sequence Ontology Term

Identifier Name Description
transcript