WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C38D9.6.1 Sequence Name  C38D9.6.1
Length (nt)  1696   Chromosome Location  V: 17559246-17561612
Chromosome . Primary Identifier  V Chromosome Location . Start  17559246
Chromosome Location . End  17561612 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C38D9.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008014 fbxa-172 C38D9.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C38D9.6 C38D9.6 1671   V: 17559271-17559296

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C38D9.6.1 17559246 17561612 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon214246   51   V: 17559246-17559296 Caenorhabditis elegans
Exon214247   67   V: 17559346-17559412 Caenorhabditis elegans
Exon214248   50   V: 17559462-17559511 Caenorhabditis elegans
Exon214249   210   V: 17559798-17560007 Caenorhabditis elegans
Exon214250   84   V: 17560053-17560136 Caenorhabditis elegans
Exon214251   108   V: 17560183-17560290 Caenorhabditis elegans
Exon214252   213   V: 17560339-17560551 Caenorhabditis elegans
Exon214253   84   V: 17560608-17560691 Caenorhabditis elegans
Exon214254   637   V: 17560737-17561373 Caenorhabditis elegans
Exon214255   192   V: 17561421-17561612 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C38D9.6.1 17559246 17561612 1

1 Sequence

Length
1696

1 Sequence Ontology Term

Identifier Name Description
transcript