WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y6G8.2a.1 Sequence Name  Y6G8.2a.1
Length (nt)  2224   Chromosome Location  V: 17594344-17598956
Chromosome . Primary Identifier  V Chromosome Location . Start  17594344
Chromosome Location . End  17598956 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y6G8.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012404 Y6G8.2 Y6G8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y6G8.2a Y6G8.2a 1776   V: 17594424-17594705

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y6G8.2a.1 17594344 17598956 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon214315   362   V: 17594344-17594705 Caenorhabditis elegans
Exon214318   691   V: 17594754-17595444 Caenorhabditis elegans
Exon214321   104   V: 17595490-17595593 Caenorhabditis elegans
Exon214324   264   V: 17596095-17596358 Caenorhabditis elegans
Exon214327   718   V: 17597943-17598660 Caenorhabditis elegans
Exon214332   85   V: 17598872-17598956 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y6G8.2a.1 17594344 17598956 -1

1 Sequence

Length
2224

1 Sequence Ontology Term

Identifier Name Description
transcript