WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y6G8.8.1 Sequence Name  Y6G8.8.1
Length (nt)  1206   Chromosome Location  V: 17620566-17622750
Chromosome . Primary Identifier  V Chromosome Location . Start  17620566
Chromosome Location . End  17622750 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y6G8.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00045501 Y6G8.8 Y6G8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y6G8.8 Y6G8.8 1206   V: 17620566-17620607

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y6G8.8.1 17620566 17622750 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon214361   42   V: 17620566-17620607 Caenorhabditis elegans
Exon214362   237   V: 17620653-17620889 Caenorhabditis elegans
Exon214363   107   V: 17621685-17621791 Caenorhabditis elegans
Exon214364   583   V: 17621879-17622461 Caenorhabditis elegans
Exon214365   237   V: 17622514-17622750 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y6G8.8.1 17620566 17622750 1

1 Sequence

Length
1206

1 Sequence Ontology Term

Identifier Name Description
transcript