WormMine: Gene WBGene00045506

• WormBase Gene ID: WBGene00045506
• Gene Name: F57G4.10
• Sequence Name: F57G4.10
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by adr-1; meg-4; and meg-3 based on RNA-seq studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF38/FTH, Caenorhabditis species; F-box A protein FB224; and FTH domain.
• Biotype: SO:0001217
• Genetic Position: :±
• Length (nt): 1350

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00045506

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:F57G4.10.1	F57G4.10.1	438	V: 17628866-17630215

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:F57G4.10	F57G4.10	438	V: 17628866-17629234

0 RNAi Result

56 Allele

• gk963271
• gk963489
• gk963304
• gk963637
• WBVar02123303
• gk964050
• WBVar02124059
• gk962704
• gk962630
• WBVar02124137
• WBVar02121802
• WBVar02123146
• WBVar02122699
• WBVar02124273
• WBVar02122867
• WBVar02122262
• WBVar02121303
• WBVar02121656
• WBVar02124504
• WBVar02124636
• WBVar02077387
• WBVar02123938
• WBVar02123716
• WBVar01812330
• WBVar01812329
• gk505029
• gk438062
• gk742374
• gk803336
• gk672695

1 Chromosome

• WormBase ID: V
• Organism: Caenorhabditis elegans
• Length (nt): 20924180

1 Chromosome Location

• Feature . Primary Identifier: WBGene00045506
• Start: 17628866
• End: 17630215
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrV_17630216..17631547
• Length (nt): 1332
• Chromosome Location: V: 17630216-17631547
• Organism: Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Genes with small RNAs downregulated in all four meg-3(ax3055) meg-4(ax3052) strains comparing to N2	DESeq2	WBPaper00057162:meg-3_meg-4_downregulated_sRNA
	Transcripts that showed significantly decreased expression in adr-1(tm668) comparing to in N2.	DESeq2, p-value < 0.05 and a fold enrichment log2fold > 0.5.	WBPaper00055226:adr-1(tm668)_downregulated

1 Expression Patterns

• Primary Identifier: Expr1152636
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/hashimshony2015

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00045506
• Start: 17628866
• End: 17630215
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 1350

1 Sequence Ontology Term