WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R12G8.2.1 Sequence Name  R12G8.2.1
Length (nt)  1694   Chromosome Location  V: 17743651-17747059
Chromosome . Primary Identifier  V Chromosome Location . Start  17743651
Chromosome Location . End  17747059 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R12G8.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006688 twk-36 R12G8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R12G8.2 R12G8.2 1689   V: 17743651-17743830

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R12G8.2.1 17743651 17747059 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon214662   180   V: 17743651-17743830 Caenorhabditis elegans
Exon214663   261   V: 17744426-17744686 Caenorhabditis elegans
Exon214664   155   V: 17744732-17744886 Caenorhabditis elegans
Exon214665   234   V: 17745173-17745406 Caenorhabditis elegans
Exon214666   142   V: 17745459-17745600 Caenorhabditis elegans
Exon214667   266   V: 17745643-17745908 Caenorhabditis elegans
Exon214668   344   V: 17746409-17746752 Caenorhabditis elegans
Exon214669   112   V: 17746948-17747059 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R12G8.2.1 17743651 17747059 -1

1 Sequence

Length
1694

1 Sequence Ontology Term

Identifier Name Description
transcript