WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C47A10.9.1 Sequence Name  C47A10.9.1
Length (nt)  978   Chromosome Location  V: 17800838-17801906
Chromosome . Primary Identifier  V Chromosome Location . Start  17800838
Chromosome Location . End  17801906 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47A10.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005491 srh-287 C47A10.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C47A10.9 C47A10.9 978   V: 17800838-17801138

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C47A10.9.1 17800838 17801906 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon214687   301   V: 17800838-17801138 Caenorhabditis elegans
Exon214688   419   V: 17801185-17801603 Caenorhabditis elegans
Exon214689   258   V: 17801649-17801906 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C47A10.9.1 17800838 17801906 1

1 Sequence

Length
978

1 Sequence Ontology Term

Identifier Name Description
transcript