WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y59A8A.1.1 Sequence Name  Y59A8A.1.1
Length (nt)  1894   Chromosome Location  V: 17861368-17870651
Chromosome . Primary Identifier  V Chromosome Location . Start  17861368
Chromosome Location . End  17870651 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y59A8A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000813 csn-1 Y59A8A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y59A8A.1 Y59A8A.1 1806   V: 17861439-17861724

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y59A8A.1.1 17861368 17870651 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon214738   357   V: 17861368-17861724 Caenorhabditis elegans
Exon214739   698   V: 17864521-17865218 Caenorhabditis elegans
Exon214741   111   V: 17866419-17866529 Caenorhabditis elegans
Exon214742   409   V: 17868605-17869013 Caenorhabditis elegans
Exon214743   257   V: 17870276-17870532 Caenorhabditis elegans
Exon214744   62   V: 17870590-17870651 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y59A8A.1.1 17861368 17870651 -1

1 Sequence

Length
1894

1 Sequence Ontology Term

Identifier Name Description
transcript