WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06H5.1.1 Sequence Name  C06H5.1.1
Length (nt)  1223   Chromosome Location  V: 17895314-17896786
Chromosome . Primary Identifier  V Chromosome Location . Start  17895314
Chromosome Location . End  17896786 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06H5.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007392 fbxa-156 C06H5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06H5.1 C06H5.1 1140   V: 17895372-17895572

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06H5.1.1 17895314 17896786 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon214784   259   V: 17895314-17895572 Caenorhabditis elegans
Exon214785   637   V: 17895617-17896253 Caenorhabditis elegans
Exon214786   87   V: 17896303-17896389 Caenorhabditis elegans
Exon214787   207   V: 17896435-17896641 Caenorhabditis elegans
Exon214788   33   V: 17896754-17896786 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06H5.1.1 17895314 17896786 -1

1 Sequence

Length
1223

1 Sequence Ontology Term

Identifier Name Description
transcript