WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06H5.2.1 Sequence Name  C06H5.2.1
Length (nt)  1203   Chromosome Location  V: 17899803-17901906
Chromosome . Primary Identifier  V Chromosome Location . Start  17899803
Chromosome Location . End  17901906 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06H5.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007393 fbxa-157 C06H5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06H5.2 C06H5.2 1149   V: 17899828-17899835

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06H5.2.1 17899803 17901906 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon214790   33   V: 17899803-17899835 Caenorhabditis elegans
Exon214791   207   V: 17899937-17900143 Caenorhabditis elegans
Exon214792   87   V: 17900189-17900275 Caenorhabditis elegans
Exon214793   637   V: 17900325-17900961 Caenorhabditis elegans
Exon214794   239   V: 17901668-17901906 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06H5.2.1 17899803 17901906 1

1 Sequence

Length
1203

1 Sequence Ontology Term

Identifier Name Description
transcript