WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y59A8B.1a.1 Sequence Name  Y59A8B.1a.1
Length (nt)  5666   Chromosome Location  V: 17936282-17949193
Chromosome . Primary Identifier  V Chromosome Location . Start  17936282
Chromosome Location . End  17949193 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y59A8B.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001080 dpy-21 Y59A8B.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y59A8B.1a Y59A8B.1a 4926   V: 17936857-17937048

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y59A8B.1a.1 17936282 17949193 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon214852   767   V: 17936282-17937048 Caenorhabditis elegans
Exon214854   72   V: 17937409-17937480 Caenorhabditis elegans
Exon214858   324   V: 17938153-17938476 Caenorhabditis elegans
Exon214860   292   V: 17939468-17939759 Caenorhabditis elegans
Exon214862   246   V: 17940761-17941006 Caenorhabditis elegans
Exon214864   3412   V: 17943129-17946540 Caenorhabditis elegans
Exon214865   68   V: 17947020-17947087 Caenorhabditis elegans
Exon214868   150   V: 17947631-17947780 Caenorhabditis elegans
Exon214870   95   V: 17947948-17948042 Caenorhabditis elegans
Exon214872   51   V: 17948906-17948956 Caenorhabditis elegans
Exon214875   189   V: 17949005-17949193 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y59A8B.1a.1 17936282 17949193 -1

1 Sequence

Length
5666

1 Sequence Ontology Term

Identifier Name Description
transcript