WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y59A8B.23b.1 Sequence Name  Y59A8B.23b.1
Length (nt)  1320   Chromosome Location  V: 17954121-17963638
Chromosome . Primary Identifier  V Chromosome Location . Start  17954121
Chromosome Location . End  17963638 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y59A8B.23b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013355 gck-3 Y59A8B.23 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y59A8B.23b Y59A8B.23b 1320   V: 17954121-17954174

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y59A8B.23b.1 17954121 17963638 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon214878   54   V: 17954121-17954174 Caenorhabditis elegans
Exon214880   161   V: 17954886-17955046 Caenorhabditis elegans
Exon214883   472   V: 17956145-17956616 Caenorhabditis elegans
Exon214885   279   V: 17958269-17958547 Caenorhabditis elegans
Exon214888   225   V: 17962278-17962502 Caenorhabditis elegans
Exon214890   129   V: 17963510-17963638 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y59A8B.23b.1 17954121 17963638 -1

1 Sequence

Length
1320

1 Sequence Ontology Term

Identifier Name Description
transcript