WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y59A8B.22a Sequence Name  Y59A8B.22a
Length (nt)  1437   Chromosome Location  V: 17969277-17969330
Chromosome . Primary Identifier  V Chromosome Location . Start  17969277
Chromosome Location . End  17969330
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y59A8B.22a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE45240 SNX-6, isoform a 54.8 478 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00113817
WBRNAi00057752
WBRNAi00037625
WBRNAi00114623
WBRNAi00113815
WBRNAi00087657
WBRNAi00097734

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y59A8B.22a 17969277 17969330 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013354 snx-6 Y59A8B.22 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y59A8B.22a 17969277 17969330 -1
CDS:Y59A8B.22a 17970157 17970306 -1
CDS:Y59A8B.22a 17971402 17971581 -1
CDS:Y59A8B.22a 17973066 17973187 -1
CDS:Y59A8B.22a 17974737 17974938 -1
CDS:Y59A8B.22a 17976189 17976312 -1
CDS:Y59A8B.22a 17976991 17977112 -1
CDS:Y59A8B.22a 17977266 17977397 -1
CDS:Y59A8B.22a 17977457 17977543 -1
CDS:Y59A8B.22a 17979818 17980081 -1

1 Sequence

Length
1437

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y59A8B.22a.1 Y59A8B.22a.1 2452   V: 17968263-17980082