WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00219624 Gene Name  linc-62
Sequence Name  ? Y59A8B.40 Organism  Caenorhabditis elegans
Biotype  SO:0001641 Genetic Position  V :13.4262±
Length (nt)  ? 524
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00219624

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y59A8B.40 Y59A8B.40 451   V: 18011580-18012103
 

Other

0 CDSs

1 RNAi Result

WormBase ID
WBRNAi00057755

25 Allele

Public Name
gk963271
gk963489
gk963304
gk963809
gk963637
gk962704
gk962630
gk440166
gk876980
gk743101
gk343749
gk901355
gk743102
WBVar02123314
WBVar01464965
WBVar01464963
WBVar01464964
WBVar01689808
WBVar02124733
WBVar01845573
WBVar01954359
WBVar01654529
WBVar01654530
WBVar01654531
WBVar01654532

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00219624 18011580 18012103 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_18012104..18012412   309 V: 18012104-18012412 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed differential expression between 24 and 26 hours post hatching L2d and dauer committed larvae of daf-9(dh, triggered by the dafachronic acid (DA) growth hormone6). Cluster 2 genes' expression gradually increased into dauer. Benjamini Hochberg corrected q-value < 0.01. WBPaper00053388:dauer_regulated_Cluster2

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00219624 18011580 18012103 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
524

1 Sequence Ontology Term